{"response":{"status":"ok","message_type":"name"},"id":23524,"name":"Anaerocaecibacter muris","url":"https://api.seqco.de/v1/names/23524.json","uri":"https://seqco.de/i:23524","rank":"species","status_name":"Valid (ICNP)","syllabication":"mu.ris","priority_date":null,"description":{"raw":"Cells are rods (length: 1.2-2.7 µm, diameter ca. 0,5µm) when grown on YCFA or mGAM Blood agar under anaerobic conditions for 2-4 weeks. In total, 93 CAZymes were identified within the genome of the type strain and only starch was predicted to be utilised as a carbon source. KEGG analysis identified pathways for the production of acetate from acetyl-CoA (EC:2.3.1.8, 2.7.2.1), propionate from propanoyl-CoA (EC:2.3.1.8, 2.7.2.1), L-cysteine and acetate from sulfide and L-serine (EC:2.3.1.30, 2.5.1.47) and L-glutamate from ammonia via L-glutamine (EC:6.3.1.2, 1.4.1.-). Antibiotic resistance was predicted based on the detection of tetracycline-resistant ribosomal protection protein. Ecological analysis suggested that the species is most prevalent within amplicon datasets from the mouse gut (16.3%). The type strain is CLA-AA-M11T. Its G+C content of genomic DNA is 50.3 mol%. It was isolated from a filtered (0.45 µm) faecal suspension of an SPF, Fsp27-/- mouse.","html":"\u003cdiv\u003eCells are rods (length: 1.2-2.7 µm, diameter ca. 0,5µm) when grown on YCFA or mGAM Blood agar under anaerobic conditions for 2-4 weeks. In total, 93 CAZymes were identified within the genome of the type strain and only starch was predicted to be utilised as a carbon source. KEGG analysis identified pathways for the production of acetate from acetyl-CoA (EC:2.3.1.8, 2.7.2.1), propionate from propanoyl-CoA (EC:2.3.1.8, 2.7.2.1), L-cysteine and acetate from sulfide and L-serine (EC:2.3.1.30, 2.5.1.47) and L-glutamate from ammonia via L-glutamine (EC:6.3.1.2, 1.4.1.-). Antibiotic resistance was predicted based on the detection of tetracycline-resistant ribosomal protection protein. Ecological analysis suggested that the species is most prevalent within amplicon datasets from the mouse gut (16.3%). The type strain is \u003cstrong\u003eCLA-AA-M11T\u003c/strong\u003e. Its G+C content of genomic DNA is 50.3 mol%. It was isolated from a filtered (0.45 µm) faecal suspension of an SPF, Fsp27-/- mouse.\u003c/div\u003e"},"formal_styling":{"raw":"Anaerocaecibacter muris(T) Afrizal et al. 2024","html":"\u003cspan data-type=name data-value=\"Anaerocaecibacter muris\" data-id=\"23524\" data-validated=1 data-correct=1 data-candidatus=0\u003e\u003ci\u003eAnaerocaecibacter muris\u003c/i\u003e\u003csup\u003eT\u003c/sup\u003e\u003c/span\u003e Afrizal et al. 2024"},"etymology":"L. gen. n. muris, of a mouse","nomenclatural_type":{"class":"Strain","id":24685,"url":"https://api.seqco.de/v1/strains/24685.json","uri":"https://seqco.de/s:24685","display":"Strain: ATCC TSD-351 = CLA AA-M11 = JCM 35013"},"proposed_in":{"id":2713,"citation":"Afrizal et al., 2022, Cell Host \u0026 Microbe","doi":"10.1016/j.chom.2022.09.011","url":"https://api.seqco.de/v1/publications/2713.json"},"classification":[{"id":753,"name":"Bacteria","rank":"domain","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":3437,"url":"https://api.seqco.de/v1/names/3437.json","uri":"https://seqco.de/i:3437","display":"Bacillus"},"created_at":"2021-09-30T17:32:32.936Z","updated_at":"2024-12-13T10:36:54.606Z","url":"https://api.seqco.de/v1/names/753.json","uri":"https://seqco.de/i:753"},{"id":778,"name":"Bacillota","rank":"phylum","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":3437,"url":"https://api.seqco.de/v1/names/3437.json","uri":"https://seqco.de/i:3437","display":"Bacillus"},"created_at":"2021-10-22T14:21:06.440Z","updated_at":"2025-12-23T12:02:35.484Z","url":"https://api.seqco.de/v1/names/778.json","uri":"https://seqco.de/i:778"},{"id":801,"name":"Clostridia","rank":"class","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"unknown","id":null,"url":null,"uri":null,"display":null},"created_at":"2021-10-22T14:21:06.742Z","updated_at":"2024-01-24T10:53:25.797Z","url":"https://api.seqco.de/v1/names/801.json","uri":"https://seqco.de/i:801"},{"id":802,"name":"Eubacteriales","rank":"order","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"unknown","id":null,"url":null,"uri":null,"display":null},"created_at":"2021-10-22T14:21:06.748Z","updated_at":"2024-01-24T10:53:25.817Z","url":"https://api.seqco.de/v1/names/802.json","uri":"https://seqco.de/i:802"},{"id":23519,"name":"Pumilibacteraceae","rank":"family","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":23518,"url":"https://api.seqco.de/v1/names/23518.json","uri":"https://seqco.de/i:23518","display":"Pumilibacter"},"created_at":"2022-06-07T08:21:31.602Z","updated_at":"2024-05-21T16:02:32.232Z","url":"https://api.seqco.de/v1/names/23519.json","uri":"https://seqco.de/i:23519"},{"id":23523,"name":"Anaerocaecibacter","rank":"genus","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":23524,"url":"https://api.seqco.de/v1/names/23524.json","uri":"https://seqco.de/i:23524","display":"Anaerocaecibacter muris"},"created_at":"2022-06-07T08:36:06.386Z","updated_at":"2024-05-10T17:11:04.133Z","url":"https://api.seqco.de/v1/names/23523.json","uri":"https://seqco.de/i:23523"}],"children":[],"created_at":"2022-06-07T08:38:12.870Z","updated_at":"2024-12-05T22:21:02.920Z"}