{"response":{"status":"ok","message_type":"name"},"id":23847,"name":"Planktophila","url":"https://api.seqco.de/v1/names/23847.json","uri":"https://seqco.de/i:23847","rank":"genus","status_name":"Valid (SeqCode)","syllabication":"Plan.kto.phi'la","priority_date":"2009-11-01T00:00:00.000Z","description":{"raw":"The name Planktophila was initially proposed in Jezbera et al. 2009 based on a enrichment culture, with 'Ca. Planktophila limnetica' strain MWH-EgelM2-3.acI as type strain. Initial description: Represented by the aerobic strain MWH-EgelM2-3.acI, which was isolated from a small lake near Salzburg, Austria. Curved rods with lengths of 1.0–1.5 mm and diameters of 0.4–0.5 mm. No pure culture is available. Contained in a stable mixed culture together with ‘Candidatus Limnoluna rubra’ and a Polynucleobacter necessarius subsp. asymbioticus strain. The mixed culture grows well in liquid NSY medium. Supplementation of NSY medium with L-alanine results in an increase of the relative proportion of ‘Ca. Planktophila limnetica’ by more than one order of\nmagnitude. ‘Ca. Planktophila limnetica’ can be recognized by the presence of the diagnostic oligonucleotide sequence 5'-GAAACTTGGTGGCATCRCCG-3' in the 16S rRNA gene (positions 183–193, E. coli numbering). Phylogenetic analysis of the 16S rRNA gene sequence indicated the affiliation of the Candidatus taxon with the order Actinomycetales.\nThe genus description was later amended with the first genome-sequenced strains (Neuenschwander et al. 2018) and strain Planktophila limnetica MMS-VB-114 (GCF_002288365.1) as type strain.","html":"\u003cdiv\u003eThe name \u003cem\u003ePlanktophila \u003c/em\u003ewas initially proposed in Jezbera et al. 2009 based on a enrichment culture, with '\u003cem\u003eCa\u003c/em\u003e. Planktophila limnetica' strain MWH-EgelM2-3.acI as type strain. Initial description: Represented by the aerobic strain MWH-EgelM2-3.acI, which was isolated from a small lake near Salzburg, Austria. Curved rods with lengths of 1.0–1.5 mm and diameters of 0.4–0.5 mm. No pure culture is available. Contained in a stable mixed culture together with ‘Candidatus Limnoluna rubra’ and a Polynucleobacter necessarius subsp. asymbioticus strain. The mixed culture grows well in liquid NSY medium. Supplementation of NSY medium with L-alanine results in an increase of the relative proportion of ‘Ca. Planktophila limnetica’ by more than one order of\u003cbr\u003emagnitude. ‘Ca. Planktophila limnetica’ can be recognized by the presence of the diagnostic oligonucleotide sequence 5'-GAAACTTGGTGGCATCRCCG-3' in the 16S rRNA gene (positions 183–193, E. coli numbering). Phylogenetic analysis of the 16S rRNA gene sequence indicated the affiliation of the Candidatus taxon with the order Actinomycetales.\u003cbr\u003eThe genus description was later amended with the first genome-sequenced strains (Neuenschwander et al. 2018) and strain \u003cem\u003ePlanktophila limnetica\u003c/em\u003e MMS-VB-114 (GCF_002288365.1) as type strain.\u003c/div\u003e"},"formal_styling":{"raw":"Planktophila (ex Jezbera et al., 2009) Neuenschwander et al., 2018 (priority 2009)","html":"\u003cspan data-type=name data-value=\"Planktophila\" data-id=\"23847\" data-validated=1 data-correct=1 data-candidatus=0\u003e\u003ci\u003ePlanktophila\u003c/i\u003e\u003c/span\u003e (ex Jezbera et al., 2009) Neuenschwander et al., 2018 (priority 2009)"},"etymology":"N.L. neut. n. plankton, plankton; N.L. fem. adj. phila, friendly to; N.L. fem. adj. Planktophila, the friend fo plankton","nomenclatural_type":{"class":"Name","id":164,"url":"https://api.seqco.de/v1/names/164.json","uri":"https://seqco.de/i:164","display":"Planktophila limnetica"},"proposed_in":{"id":2764,"citation":"Neuenschwander et al., 2018, The ISME Journal","doi":"10.1038/ismej.2017.156","url":"https://api.seqco.de/v1/publications/2764.json"},"not_validly_proposed_in":[{"id":876,"citation":"Jezbera et al., 2009, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","doi":"10.1099/ijs.0.010199-0","url":"https://api.seqco.de/v1/publications/876.json"}],"classification":[{"id":753,"name":"Bacteria","rank":"domain","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":3437,"url":"https://api.seqco.de/v1/names/3437.json","uri":"https://seqco.de/i:3437","display":"Bacillus"},"created_at":"2021-09-30T17:32:32.936Z","updated_at":"2024-12-13T10:36:54.606Z","url":"https://api.seqco.de/v1/names/753.json","uri":"https://seqco.de/i:753"},{"id":812,"name":"Actinomycetota","rank":"phylum","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2021-10-22T14:21:06.866Z","updated_at":"2024-06-06T17:52:11.291Z","url":"https://api.seqco.de/v1/names/812.json","uri":"https://seqco.de/i:812"},{"id":34427,"name":"Actinomycetes","rank":"class","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2024-01-24T10:46:48.721Z","updated_at":"2024-06-11T11:10:55.971Z","url":"https://api.seqco.de/v1/names/34427.json","uri":"https://seqco.de/i:34427"},{"id":23833,"name":"Nanopelagicales","rank":"order","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-04T16:55:53.055Z","updated_at":"2025-06-05T17:26:21.072Z","url":"https://api.seqco.de/v1/names/23833.json","uri":"https://seqco.de/i:23833"},{"id":23843,"name":"Nanopelagicaceae","rank":"family","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-11T18:25:38.461Z","updated_at":"2025-06-05T17:26:21.050Z","url":"https://api.seqco.de/v1/names/23843.json","uri":"https://seqco.de/i:23843"}],"children":[{"id":51252,"name":"Planktophila aestivalis","url":"https://api.seqco.de/v1/names/51252.json","uri":"https://seqco.de/i:51252"},{"id":51026,"name":"Planktophila alpina","url":"https://api.seqco.de/v1/names/51026.json","uri":"https://seqco.de/i:51026"},{"id":43951,"name":"Planktophila aquatilis","url":"https://api.seqco.de/v1/names/43951.json","uri":"https://seqco.de/i:43951"},{"id":51477,"name":"Planktophila calida","url":"https://api.seqco.de/v1/names/51477.json","uri":"https://seqco.de/i:51477"},{"id":42384,"name":"Planktophila dulcis","url":"https://api.seqco.de/v1/names/42384.json","uri":"https://seqco.de/i:42384"},{"id":51480,"name":"Planktophila fontis","url":"https://api.seqco.de/v1/names/51480.json","uri":"https://seqco.de/i:51480"},{"id":51028,"name":"Planktophila glycosidica","url":"https://api.seqco.de/v1/names/51028.json","uri":"https://seqco.de/i:51028"},{"id":49103,"name":"Planktophila grossartii","url":"https://api.seqco.de/v1/names/49103.json","uri":"https://seqco.de/i:49103"},{"id":51476,"name":"Planktophila hypolimnetica","url":"https://api.seqco.de/v1/names/51476.json","uri":"https://seqco.de/i:51476"},{"id":51027,"name":"Planktophila jirickensis","url":"https://api.seqco.de/v1/names/51027.json","uri":"https://seqco.de/i:51027"},{"id":42470,"name":"Planktophila lacus","url":"https://api.seqco.de/v1/names/42470.json","uri":"https://seqco.de/i:42470"},{"id":51481,"name":"Planktophila landstejnensis","url":"https://api.seqco.de/v1/names/51481.json","uri":"https://seqco.de/i:51481"},{"id":164,"name":"Planktophila limnetica","url":"https://api.seqco.de/v1/names/164.json","uri":"https://seqco.de/i:164"},{"id":51472,"name":"Planktophila maxigenoma","url":"https://api.seqco.de/v1/names/51472.json","uri":"https://seqco.de/i:51472"},{"id":51483,"name":"Planktophila ortensis","url":"https://api.seqco.de/v1/names/51483.json","uri":"https://seqco.de/i:51483"},{"id":51473,"name":"Planktophila perrara","url":"https://api.seqco.de/v1/names/51473.json","uri":"https://seqco.de/i:51473"},{"id":51471,"name":"Planktophila polyoliphila","url":"https://api.seqco.de/v1/names/51471.json","uri":"https://seqco.de/i:51471"},{"id":51470,"name":"Planktophila primivernalis","url":"https://api.seqco.de/v1/names/51470.json","uri":"https://seqco.de/i:51470"},{"id":51475,"name":"Planktophila rara","url":"https://api.seqco.de/v1/names/51475.json","uri":"https://seqco.de/i:51475"},{"id":51469,"name":"Planktophila rimovensis","url":"https://api.seqco.de/v1/names/51469.json","uri":"https://seqco.de/i:51469"},{"id":43950,"name":"Planktophila rubra","url":"https://api.seqco.de/v1/names/43950.json","uri":"https://seqco.de/i:43950"},{"id":51479,"name":"Planktophila stagnalis","url":"https://api.seqco.de/v1/names/51479.json","uri":"https://seqco.de/i:51479"},{"id":43170,"name":"Planktophila sulfonica","url":"https://api.seqco.de/v1/names/43170.json","uri":"https://seqco.de/i:43170"},{"id":51482,"name":"Planktophila tarnitensis","url":"https://api.seqco.de/v1/names/51482.json","uri":"https://seqco.de/i:51482"},{"id":51474,"name":"Planktophila thermolimnae","url":"https://api.seqco.de/v1/names/51474.json","uri":"https://seqco.de/i:51474"},{"id":51478,"name":"Planktophila toyensis","url":"https://api.seqco.de/v1/names/51478.json","uri":"https://seqco.de/i:51478"},{"id":49118,"name":"Planktophila turicensis","url":"https://api.seqco.de/v1/names/49118.json","uri":"https://seqco.de/i:49118"},{"id":23846,"name":"Planktophila vernalis","url":"https://api.seqco.de/v1/names/23846.json","uri":"https://seqco.de/i:23846"},{"id":42262,"name":"Planktophila versatilis","url":"https://api.seqco.de/v1/names/42262.json","uri":"https://seqco.de/i:42262"},{"id":51468,"name":"Planktophila vulgaris","url":"https://api.seqco.de/v1/names/51468.json","uri":"https://seqco.de/i:51468"},{"id":48741,"name":"Planktophila warneckei","url":"https://api.seqco.de/v1/names/48741.json","uri":"https://seqco.de/i:48741"},{"id":51484,"name":"Planktophila zluticensis","url":"https://api.seqco.de/v1/names/51484.json","uri":"https://seqco.de/i:51484"}],"register":{"acc_url":"seqco.de/r:kv6gij82","title":"Planktophila gen. nov.","priority_date":"2025-04-30T15:20:03.634Z","url":"https://api.seqco.de/v1/registers/r:kv6gij82.json","uri":"https://seqco.de/r:kv6gij82"},"created_at":"2022-12-11T18:59:17.116Z","updated_at":"2025-06-05T17:26:21.016Z"}