{"response":{"status":"ok","message_type":"name"},"id":51483,"name":"Planktophila ortensis","url":"https://api.seqco.de/v1/names/51483.json","uri":"https://seqco.de/i:51483","rank":"species","status_name":"Valid (SeqCode)","syllabication":"or.ten'sis","priority_date":"2026-09-15T16:32:33.985Z","description":{"raw":"Etymology. It is named after Lake Orta, Italy, the place from which the representative strain was isolated.\nBrief description. Planktophila ortaensis OrE-3 (ENA accession number GCA_965268165) was isolated from the epilimnion (5m depth) of the oligotrophic Lake Orta, Italy (date: 2021-07-12) and it is the only isolated representative of the species. It has a complete circular genome of 1,475,422 bp, a GC content of 47.6% and a coding density of 95.7%. The closest isolated species is Planktophila lacus MMS-21-148, with whom it shares an average nucleotide identity of 93.5%. It encodes one rRNA operon and 41 tRNA genes; additionally, it has both actinorhodopsin and heliorhodopsin, and the capacity for retinal biosynthesis. It lacks the oxidative part of the pentose phosphate pathway, as well as the capacity to synthesize asparagine. Recruitment analysis shows that this species is relatively abundant in freshwater environments and widespread, including Torrens River (Australia), Římov and Klíčava Reservoirs (Czech Republic), the German lakes Breiter Luzin, Stechlin, Tiefwaren, Lake Zurich and Loclat (Switzerland), Lake Michigan (USA), and Lake Micmac (Canada). The Current GTDB classification (r220) is d__Bacteria;p__Actinomycetota;c__Actinomycetia;o__Nanopelagicales; f__Nanopelagicaceae; g__Planktophila; s__.","html":"\u003cdiv\u003eEtymology. It is named after Lake Orta, Italy, the place from which the representative strain was isolated.\u003c/div\u003e\u003cdiv\u003eBrief description. \u003cem\u003ePlanktophila ortaensis\u003c/em\u003e OrE-3 (ENA accession number GCA_965268165) was isolated from the epilimnion (5m depth) of the oligotrophic Lake Orta, Italy (date: 2021-07-12) and it is the only isolated representative of the species. It has a complete circular genome of 1,475,422 bp, a GC content of 47.6% and a coding density of 95.7%. The closest isolated species is \u003cem\u003ePlanktophila lacus\u003c/em\u003e MMS-21-148, with whom it shares an average nucleotide identity of 93.5%. It encodes one rRNA operon and 41 tRNA genes; additionally, it has both actinorhodopsin and heliorhodopsin, and the capacity for retinal biosynthesis. It lacks the oxidative part of the pentose phosphate pathway, as well as the capacity to synthesize asparagine. Recruitment analysis shows that this species is relatively abundant in freshwater environments and widespread, including Torrens River (Australia), Římov and Klíčava Reservoirs (Czech Republic), the German lakes Breiter Luzin, Stechlin, Tiefwaren, Lake Zurich and Loclat (Switzerland), Lake Michigan (USA), and Lake Micmac (Canada). The Current GTDB classification (r220) is d__Bacteria;p__Actinomycetota;c__Actinomycetia;o__Nanopelagicales; f__Nanopelagicaceae; g__Planktophila; s__.\u003c/div\u003e"},"formal_styling":{"raw":"Planktophila ortensis Chiriac et al., 2025 (priority 2026)","html":"\u003cspan data-type=name data-value=\"Planktophila ortensis\" data-id=\"51483\" data-validated=1 data-correct=1 data-candidatus=0\u003e\u003ci\u003ePlanktophila ortensis\u003c/i\u003e\u003c/span\u003e Chiriac et al., 2025 (priority 2026)"},"etymology":"N.L. fem. adj. ortensis, It is named after Lake Orta, Italy, the place from which the representative strain was isolated.","nomenclatural_type":{"class":"Genome","id":4099,"url":"https://api.seqco.de/v1/genomes/4099.json","uri":"https://seqco.de/g:4099","display":"NCBI Assembly: GCA_965268165.1"},"proposed_in":{"id":4807,"citation":"Chiriac et al., 2025, Microbiome","doi":"10.1186/s40168-025-02272-x","url":"https://api.seqco.de/v1/publications/4807.json"},"classification":[{"id":753,"name":"Bacteria","rank":"domain","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":3437,"url":"https://api.seqco.de/v1/names/3437.json","uri":"https://seqco.de/i:3437","display":"Bacillus"},"created_at":"2021-09-30T17:32:32.936Z","updated_at":"2024-12-13T10:36:54.606Z","url":"https://api.seqco.de/v1/names/753.json","uri":"https://seqco.de/i:753"},{"id":812,"name":"Actinomycetota","rank":"phylum","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2021-10-22T14:21:06.866Z","updated_at":"2024-06-06T17:52:11.291Z","url":"https://api.seqco.de/v1/names/812.json","uri":"https://seqco.de/i:812"},{"id":34427,"name":"Actinomycetes","rank":"class","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2024-01-24T10:46:48.721Z","updated_at":"2024-06-11T11:10:55.971Z","url":"https://api.seqco.de/v1/names/34427.json","uri":"https://seqco.de/i:34427"},{"id":23833,"name":"Nanopelagicales","rank":"order","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-04T16:55:53.055Z","updated_at":"2025-06-05T17:26:21.072Z","url":"https://api.seqco.de/v1/names/23833.json","uri":"https://seqco.de/i:23833"},{"id":23843,"name":"Nanopelagicaceae","rank":"family","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-11T18:25:38.461Z","updated_at":"2025-06-05T17:26:21.050Z","url":"https://api.seqco.de/v1/names/23843.json","uri":"https://seqco.de/i:23843"},{"id":23847,"name":"Planktophila","rank":"genus","status_name":"Valid (SeqCode)","priority_date":"2009-11-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":164,"url":"https://api.seqco.de/v1/names/164.json","uri":"https://seqco.de/i:164","display":"Planktophila limnetica"},"created_at":"2022-12-11T18:59:17.116Z","updated_at":"2025-06-05T17:26:21.016Z","url":"https://api.seqco.de/v1/names/23847.json","uri":"https://seqco.de/i:23847"}],"children":[],"register":{"acc_url":"seqco.de/r:pdwftyg3","title":"Register list for 26 new names including Aquilimus gen. nov.","priority_date":"2026-09-15T16:32:33.985Z","url":"https://api.seqco.de/v1/registers/r:pdwftyg3.json","uri":"https://seqco.de/r:pdwftyg3"},"created_at":"2025-08-04T09:30:38.749Z","updated_at":"2026-10-27T11:47:09.596Z"}