{"response":{"status":"ok","message_type":"name"},"id":51484,"name":"Planktophila zluticensis","url":"https://api.seqco.de/v1/names/51484.json","uri":"https://seqco.de/i:51484","rank":"species","status_name":"Valid (SeqCode)","syllabication":"z.lu.ti.cen'sis","priority_date":"2026-09-15T16:32:33.985Z","description":{"raw":"Etymology. It is named after the Žlutice Reservoir, Czech Republic, the place from which the representative strain was isolated.\nBrief description. Planktophila zlutica MZLE-14 (ENA accession number GCA_965268005) was isolated from the epilimnion (5m depth) of the eutrophic Žlutice Reservoir, Czech Republic (date: 2021-04-07) and it is the only isolated representative of the species. It has a complete circular genome of 1,406,539 bp, a GC content of 46.1% and a coding density of 95.9%. The closest isolated species is Planktophila warneckii RE-8, with which it shares an average nucleotide identity of 87.8%. It encodes one rRNA operon and 39 tRNA genes; additionally, it has both actinorhodopsin and heliorhodopsin but lacks the capacity for retinal biosynthesis. Also, it lacks the oxidative part of the pentose phosphate pathway but can synthesize all amino acids. It has a limited distribution and low abundance, being recovered in the recruitment analysis only from the Žlutice and Římov Reservoirs in Czech Republic. The Current GTDB classification (r220) is d__Bacteria;p__Actinomycetota; c__Actinomycetia;o__Nanopelagicales; f__Nanopelagicaceae; g__Planktophila; s__.","html":"\u003cdiv\u003eEtymology. It is named after the Žlutice Reservoir, Czech Republic, the place from which the representative strain was isolated.\u003c/div\u003e\u003cdiv\u003eBrief description. \u003cem\u003ePlanktophila zlutica\u003c/em\u003e MZLE-14 (ENA accession number GCA_965268005) was isolated from the epilimnion (5m depth) of the eutrophic Žlutice Reservoir, Czech Republic (date: 2021-04-07) and it is the only isolated representative of the species. It has a complete circular genome of 1,406,539 bp, a GC content of 46.1% and a coding density of 95.9%. The closest isolated species is \u003cem\u003ePlanktophila warneckii\u003c/em\u003e RE-8, with which it shares an average nucleotide identity of 87.8%. It encodes one rRNA operon and 39 tRNA genes; additionally, it has both actinorhodopsin and heliorhodopsin but lacks the capacity for retinal biosynthesis. Also, it lacks the oxidative part of the pentose phosphate pathway but can synthesize all amino acids. It has a limited distribution and low abundance, being recovered in the recruitment analysis only from the Žlutice and Římov Reservoirs in Czech Republic. The Current GTDB classification (r220) is d__Bacteria;p__Actinomycetota; c__Actinomycetia;o__Nanopelagicales; f__Nanopelagicaceae; g__Planktophila; s__.\u003c/div\u003e"},"formal_styling":{"raw":"Planktophila zluticensis Chiriac et al., 2025 (priority 2026)","html":"\u003cspan data-type=name data-value=\"Planktophila zluticensis\" data-id=\"51484\" data-validated=1 data-correct=1 data-candidatus=0\u003e\u003ci\u003ePlanktophila zluticensis\u003c/i\u003e\u003c/span\u003e Chiriac et al., 2025 (priority 2026)"},"etymology":"L. fem. adj. zluticensis, from the Žlutice Reservoir in the Czech Republic. ","nomenclatural_type":{"class":"Genome","id":4100,"url":"https://api.seqco.de/v1/genomes/4100.json","uri":"https://seqco.de/g:4100","display":"NCBI Assembly: GCA_965268005.1"},"proposed_in":{"id":4807,"citation":"Chiriac et al., 2025, Microbiome","doi":"10.1186/s40168-025-02272-x","url":"https://api.seqco.de/v1/publications/4807.json"},"classification":[{"id":753,"name":"Bacteria","rank":"domain","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":3437,"url":"https://api.seqco.de/v1/names/3437.json","uri":"https://seqco.de/i:3437","display":"Bacillus"},"created_at":"2021-09-30T17:32:32.936Z","updated_at":"2024-12-13T10:36:54.606Z","url":"https://api.seqco.de/v1/names/753.json","uri":"https://seqco.de/i:753"},{"id":812,"name":"Actinomycetota","rank":"phylum","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2021-10-22T14:21:06.866Z","updated_at":"2024-06-06T17:52:11.291Z","url":"https://api.seqco.de/v1/names/812.json","uri":"https://seqco.de/i:812"},{"id":34427,"name":"Actinomycetes","rank":"class","status_name":"Valid (ICNP)","priority_date":null,"nomenclatural_type":{"class":"Name","id":1373,"url":"https://api.seqco.de/v1/names/1373.json","uri":"https://seqco.de/i:1373","display":"Actinomyces"},"created_at":"2024-01-24T10:46:48.721Z","updated_at":"2024-06-11T11:10:55.971Z","url":"https://api.seqco.de/v1/names/34427.json","uri":"https://seqco.de/i:34427"},{"id":23833,"name":"Nanopelagicales","rank":"order","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-04T16:55:53.055Z","updated_at":"2025-06-05T17:26:21.072Z","url":"https://api.seqco.de/v1/names/23833.json","uri":"https://seqco.de/i:23833"},{"id":23843,"name":"Nanopelagicaceae","rank":"family","status_name":"Valid (SeqCode)","priority_date":"2018-01-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":23834,"url":"https://api.seqco.de/v1/names/23834.json","uri":"https://seqco.de/i:23834","display":"Nanopelagicus"},"created_at":"2022-12-11T18:25:38.461Z","updated_at":"2025-06-05T17:26:21.050Z","url":"https://api.seqco.de/v1/names/23843.json","uri":"https://seqco.de/i:23843"},{"id":23847,"name":"Planktophila","rank":"genus","status_name":"Valid (SeqCode)","priority_date":"2009-11-01T00:00:00.000Z","nomenclatural_type":{"class":"Name","id":164,"url":"https://api.seqco.de/v1/names/164.json","uri":"https://seqco.de/i:164","display":"Planktophila limnetica"},"created_at":"2022-12-11T18:59:17.116Z","updated_at":"2025-06-05T17:26:21.016Z","url":"https://api.seqco.de/v1/names/23847.json","uri":"https://seqco.de/i:23847"}],"children":[],"register":{"acc_url":"seqco.de/r:pdwftyg3","title":"Register list for 26 new names including Aquilimus gen. nov.","priority_date":"2026-09-15T16:32:33.985Z","url":"https://api.seqco.de/v1/registers/r:pdwftyg3.json","uri":"https://seqco.de/r:pdwftyg3"},"created_at":"2025-08-04T09:32:22.498Z","updated_at":"2026-10-27T11:47:09.158Z"}