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Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/3573.json"},{"id":3574,"given":"S.","family":"Nome","created_at":"2019-04-15T18:48:03.262Z","updated_at":"2019-04-15T18:48:03.262Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/3574.json"}],"names":[{"id":181,"name":"Candidatus Phytoplasma fraxini","url":"https://api.seqco.de/v1/names/181.json","uri":"https://seqco.de/i:181"}],"subjects":[{"id":5,"name":"Agronomy and Crop Science","url":"https://api.seqco.de/v1/subjects/5.json"},{"id":25,"name":"Horticulture","url":"https://api.seqco.de/v1/subjects/25.json"},{"id":24,"name":"Plant Science","url":"https://api.seqco.de/v1/subjects/24.json"}]},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json","link_ext":"https://doi.org/10.1128/aem.71.11.6473-6478.2005","title":"Diversity of “\n            \u003ci\u003eCandidatus\u003c/i\u003e\n            Liberibacter asiaticus,” Based on the\n            \u003ci\u003eomp\u003c/i\u003e\n            Gene Sequence","journal":"Applied and Environmental Microbiology","journal_loc":"71 (11)","journal_date":"2005-11-01","pub_type":"journal-article","abstract":"\u003cjats:title\u003eABSTRACT\u003c/jats:title\u003e\n          \u003cjats:p\u003e\n            Huanglongbing (yellow dragon disease) is a destructive disease of citrus. The etiological agent is a noncultured, phloem-restricted alpha-proteobacterium, “\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Liberibacter africanus” in Africa and “\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Liberibacter asiaticus” in Asia. In this study, we used an\n            \u003cjats:italic\u003eomp\u003c/jats:italic\u003e\n            -based PCR-restriction fragment length polymorphism (RFLP) approach to analyze the genetic variability of “\n            \u003cjats:italic\u003eCa\u003c/jats:italic\u003e\n            . Liberibacter asiaticus” isolates. By using five different enzymes, each the 10 isolates tested could be associated with a specific combination of restriction profiles. The results indicate that the species “\n            \u003cjats:italic\u003eCa\u003c/jats:italic\u003e\n            . Liberibacter asiaticus,” even within a given region, may comprise several different variants. Thus,\n            \u003cjats:italic\u003eomp\u003c/jats:italic\u003e\n            -based PCR-RFLP analysis is a simple method for detecting and differentiating “\n            \u003cjats:italic\u003eCa\u003c/jats:italic\u003e\n            . Liberibacter asiaticus” isolates.\n          \u003c/jats:p\u003e","long_citation_html":"Bastianel et al. (2005). Diversity of “\n            \u003ci\u003eCandidatus\u003c/i\u003e\n            Liberibacter asiaticus,” Based on the\n            \u003ci\u003eomp\u003c/i\u003e\n            Gene Sequence.\n\u003ci\u003eApplied and Environmental Microbiology\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1128/aem.71.11.6473-6478.2005\" target=\"_blank\"\u003eDOI: 10.1128/aem.71.11.6473-6478.2005\u003c/a\u003e\n","created_at":"2019-04-15T18:46:17.390Z","updated_at":"2025-11-06T11:27:35.520Z","authors":[{"id":665,"given":"C.","family":"Bastianel","created_at":"2019-04-15T18:46:17.395Z","updated_at":"2019-04-15T18:46:17.395Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/665.json"},{"id":666,"given":"M.","family":"Garnier-Semancik","created_at":"2019-04-15T18:46:17.401Z","updated_at":"2019-04-15T18:46:17.401Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/666.json"},{"id":667,"given":"J.","family":"Renaudin","created_at":"2019-04-15T18:46:17.409Z","updated_at":"2019-04-15T18:46:17.409Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/667.json"},{"id":9718,"given":"J. M.","family":"Bové","created_at":"2021-12-15T17:22:00.773Z","updated_at":"2021-12-15T17:22:00.773Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/9718.json"},{"id":668,"given":"S.","family":"Eveillard","created_at":"2019-04-15T18:46:17.420Z","updated_at":"2019-04-15T18:46:17.420Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/668.json"}],"names":[{"id":1,"name":"Liberibacter asiaticus","url":"https://api.seqco.de/v1/names/1.json","uri":"https://seqco.de/i:1"}],"subjects":[{"id":23,"name":"Applied Microbiology and Biotechnology","url":"https://api.seqco.de/v1/subjects/23.json"},{"id":4,"name":"Biotechnology","url":"https://api.seqco.de/v1/subjects/4.json"},{"id":6,"name":"Ecology","url":"https://api.seqco.de/v1/subjects/6.json"},{"id":22,"name":"Food Science","url":"https://api.seqco.de/v1/subjects/22.json"}]},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json","link_ext":"https://doi.org/10.1128/aac.49.11.4530-4535.2005","title":"Evaluation of Antibiotic Treatment against “\n            \u003ci\u003eCandidatus\u003c/i\u003e\n            Helicobacter suis” in a Mouse Model","journal":"Antimicrobial Agents and Chemotherapy","journal_loc":"49 (11)","journal_date":"2005-11-01","pub_type":"journal-article","abstract":"\u003cjats:title\u003eABSTRACT\u003c/jats:title\u003e\n          \u003cjats:p\u003e\n            “\n            \u003cjats:italic\u003eHelicobacter\nheilmannii\u003c/jats:italic\u003e\n            ” (proposed name) type 1 colonizes\nthe human stomach. It has been shown to be identical to“\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis,” a\n            \u003cjats:italic\u003eHelicobacter\u003c/jats:italic\u003e\n            species colonizing the stomachs of \u0026gt;60%\nof slaughter pigs. This bacterium has not been isolated in vitro until\nnow. Antibiotic susceptibility testing of “\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis” has not been carried out so far. For the\npresent study, a mouse model was adopted to evaluate the antibiotic\nsusceptibility of this organism. Mice infected with“\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis” were treated\nwith amoxicillin and omeprazole, a therapy which is used to treat\n            \u003cjats:italic\u003eH. heilmannii\u003c/jats:italic\u003e\n            infections in humans. Two different isolates of“\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis” were tested.\nThe excretion of bacterial DNA was assessed during treatment, using PCR\non fecal samples. At the end of the experiment, 8 days after the\ncessation of treatment, the presence of infection was evaluated using a\nurease test and a PCR test on stomach samples. A marked decrease in the\nexcretion of bacterial DNA was observed a few days after the onset of\ntreatment, and the level remained low until the end of the experiment.\nA difference in susceptibility between the two“\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis” isolates was\npointed out. The in vivo mouse model infected with“\n            \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n            Helicobacter suis” will be useful\nfor further screening of potential therapeutic\nregimens.\n          \u003c/jats:p\u003e","long_citation_html":"Hellemans et al. (2005). Evaluation of Antibiotic Treatment against “\n            \u003ci\u003eCandidatus\u003c/i\u003e\n            Helicobacter suis” in a Mouse Model.\n\u003ci\u003eAntimicrobial Agents and Chemotherapy\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1128/aac.49.11.4530-4535.2005\" target=\"_blank\"\u003eDOI: 10.1128/aac.49.11.4530-4535.2005\u003c/a\u003e\n","created_at":"2019-04-15T18:46:10.960Z","updated_at":"2025-11-06T11:27:08.197Z","authors":[{"id":568,"given":"A.","family":"Hellemans","created_at":"2019-04-15T18:46:10.972Z","updated_at":"2019-04-15T18:46:10.972Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary 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Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/280.json"},{"id":276,"given":"R.","family":"Ducatelle","created_at":"2019-04-15T18:46:01.037Z","updated_at":"2019-04-15T18:46:01.037Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/276.json"}],"names":[{"id":182,"name":"Candidatus Helicobacter suis","url":"https://api.seqco.de/v1/names/182.json","uri":"https://seqco.de/i:182"}],"subjects":[{"id":17,"name":"Infectious Diseases","url":"https://api.seqco.de/v1/subjects/17.json"},{"id":20,"name":"Pharmacology","url":"https://api.seqco.de/v1/subjects/20.json"},{"id":19,"name":"Pharmacology (medical)","url":"https://api.seqco.de/v1/subjects/19.json"}]},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json","link_ext":"https://doi.org/10.1099/ijs.0.63797-0","title":"‘Candidatus Phytoplasma graminis' and ‘Candidatus Phytoplasma caricae’, two novel phytoplasmas associated with diseases of sugarcane, weeds and papaya in Cuba","journal":"International Journal of Systematic and Evolutionary Microbiology","journal_loc":"55 (6)","journal_date":"2005-11-01","pub_type":"journal-article","abstract":"\u003cjats:p\u003eDuring 2003, surveys of sugarcane yellow leaf disease and papaya bunchy top-like disease were carried out on plantations in Havana province, Cuba, to determine the roles of weeds and \u003cjats:italic\u003eAuchenorrhyncha\u003c/jats:italic\u003e insects in the epidemiology of these diseases. More than 250 plant and insect samples were collected and indexed by using a nested PCR for phytoplasma 16S rDNA with the generic primer pairs P1/P7 and R16F2n/R16R2. The PCR products were further characterized by restriction fragment length polymorphism using \u003cjats:italic\u003eHae\u003c/jats:italic\u003eIII, \u003cjats:italic\u003eAlu\u003c/jats:italic\u003eI, \u003cjats:italic\u003eSau\u003c/jats:italic\u003e3AI, \u003cjats:italic\u003eTru\u003c/jats:italic\u003e9I, \u003cjats:italic\u003eHha\u003c/jats:italic\u003eI, \u003cjats:italic\u003eHpa\u003c/jats:italic\u003eII and \u003cjats:italic\u003eTaq\u003c/jats:italic\u003eI endonucleases, giving patterns that distinguished them from those of the other reference phytoplasmas analysed. Phylogenetic analysis of 16S rRNA gene sequences identified the phytoplasmas present in sugarcane (\u003cjats:italic\u003eSaccharum officinarum\u003c/jats:italic\u003e L.), \u003cjats:italic\u003eCynodon dactylon\u003c/jats:italic\u003e L., \u003cjats:italic\u003eConyza canadensis\u003c/jats:italic\u003e L. Cronq., S\u003cjats:italic\u003eorghum halepense\u003c/jats:italic\u003e L. Pers., \u003cjats:italic\u003eMacroptilium lathyroides\u003c/jats:italic\u003e L. Urb., \u003cjats:italic\u003eSaccharosydne saccharivora\u003c/jats:italic\u003e (Westwood) and \u003cjats:italic\u003eCedusa\u003c/jats:italic\u003e spp., and those in papaya (\u003cjats:italic\u003eCarica papaya\u003c/jats:italic\u003e L.) and \u003cjats:italic\u003eEmpoasca papayae\u003c/jats:italic\u003e, as two novel provisional phytoplasma species. We propose that these phytoplasmas should be given \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e status, as ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Phytoplasma graminis' and ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Phytoplasma caricae’, respectively.\u003c/jats:p\u003e","long_citation_html":"Arocha et al. (2005). ‘Candidatus Phytoplasma graminis\u0026#39; and ‘Candidatus Phytoplasma caricae’, two novel phytoplasmas associated with diseases of sugarcane, weeds and papaya in Cuba.\n\u003ci\u003eInternational Journal of Systematic and Evolutionary Microbiology\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1099/ijs.0.63797-0\" target=\"_blank\"\u003eDOI: 10.1099/ijs.0.63797-0\u003c/a\u003e\n","created_at":"2019-04-15T18:46:05.632Z","updated_at":"2025-11-06T11:26:01.656Z","authors":[{"id":9630,"given":"Yaima","family":"Arocha","created_at":"2021-12-15T17:19:36.690Z","updated_at":"2021-12-15T17:19:36.690Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and 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et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json","link_ext":"https://doi.org/10.1099/ijs.0.63677-0","title":"‘Candidatus Liberibacter americanus’, associated with citrus huanglongbing (greening disease) in São Paulo State, Brazil","journal":"International Journal of Systematic and Evolutionary Microbiology","journal_loc":"55 (5)","journal_date":"2005-09-01","pub_type":"journal-article","abstract":"\u003cjats:p\u003eSymptoms of huanglongbing (HLB) were reported in São Paulo State (SPS), Brazil, in March 2004. In Asia, HLB is caused by ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Liberibacter asiaticus' and in Africa by ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Liberibacter africanus’. Detection of the liberibacters is based on PCR amplification of their 16S rRNA gene with specific primers. Leaves with blotchy mottle symptoms characteristic of HLB were sampled in several farms of SPS and tested for the presence of liberibacters. ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus' was detected in a small number of samples but most samples gave negative PCR results. Therefore, a new HLB pathogen was suspected. Evidence for an SPS-HLB bacterium in symptomatic leaves was obtained by PCR amplification with universal primers for prokaryotic 16S rRNA gene sequences. The amplified 16S rRNA gene was cloned and sequenced. Sequence analysis and phylogeny studies showed that the 16S rRNA gene possessed the oligonucleotide signatures and the secondary loop structure characteristic of the \u003cjats:italic\u003eα\u003c/jats:italic\u003e-\u003cjats:italic\u003eProteobacteria\u003c/jats:italic\u003e, including the liberibacters. The 16S rRNA gene sequence phylogenetic tree showed that the SPS-HLB bacterium clustered within the \u003cjats:italic\u003eα\u003c/jats:italic\u003e-\u003cjats:italic\u003eProteobacteria\u003c/jats:italic\u003e, the liberibacters being its closest relatives. For these reasons, the SPS-HLB bacterium is considered a member of the genus ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. Liberibacter’. However, while the 16S rRNA gene sequences of ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus' and ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. africanus' had 98·4 % similarity, the 16S rRNA gene sequence of the SPS-HLB liberibacter had only 96·0 % similarity with the 16S rRNA gene sequences of ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus' or ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. africanus’. This lower similarity was reflected in the phylogenetic tree, where the SPS-HLB liberibacter did not cluster within the ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L asiaticus’/‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. africanus group’, but as a separate branch. Within the genus ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Liberibacter’ and for a given species, the 16S/23S intergenic region does not vary greatly. The intergenic regions of three strains of ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus’, from India, the People's Republic of China and Japan, were found to have identical or almost identical sequences. In contrast, the intergenic regions of the SPS-HLB liberibacter, ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus' and ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. africanus' had quite different sequences, with similarity between 66·0 and 79·5 %. These results confirm that the SPS-HLB liberibacter is a novel species for which the name ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Liberibacter americanus' is proposed. Like the African and the Asian liberibacters, the ‘American’ liberibacter is restricted to the sieve tubes of the citrus host. The liberibacter could also be detected by PCR amplification of the 16S rRNA gene in \u003cjats:italic\u003eDiaphorina citri\u003c/jats:italic\u003e, the psyllid vector of ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus’, suggesting that this psyllid is also a vector of ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. americanus' in SPS. ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. americanus' was detected in 216 of 218 symptomatic leaf samples from 47 farms in 35 municipalities, while ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. asiaticus' was detected in only 4 of the 218 samples, indicating that ‘\u003cjats:italic\u003eCa\u003c/jats:italic\u003e. L. americanus' is the major cause of HLB in SPS.\u003c/jats:p\u003e","long_citation_html":"Teixeira et al. (2005). ‘Candidatus Liberibacter americanus’, associated with citrus huanglongbing (greening disease) in São Paulo State, Brazil.\n\u003ci\u003eInternational Journal of Systematic and Evolutionary Microbiology\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1099/ijs.0.63677-0\" target=\"_blank\"\u003eDOI: 10.1099/ijs.0.63677-0\u003c/a\u003e\n","created_at":"2019-04-15T18:46:05.603Z","updated_at":"2025-11-06T11:26:00.851Z","authors":[{"id":9721,"given":"Diva do Carmo","family":"Teixeira","created_at":"2021-12-15T17:22:08.294Z","updated_at":"2021-12-15T17:22:08.294Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental 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Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/9723.json"},{"id":3296,"given":"Antonio Juliano","family":"Ayres","created_at":"2019-04-15T18:47:48.754Z","updated_at":"2019-04-15T18:47:48.754Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/3296.json"},{"id":1335,"given":"Joseph","family":"Bové","created_at":"2019-04-15T18:46:34.250Z","updated_at":"2019-04-15T18:46:34.250Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/1335.json"}],"names":[{"id":26,"name":"Candidatus Liberibacter americanus","url":"https://api.seqco.de/v1/names/26.json","uri":"https://seqco.de/i:26"}],"subjects":[{"id":2,"name":"Ecology, Evolution, Behavior and Systematics","url":"https://api.seqco.de/v1/subjects/2.json"},{"id":11,"name":"General Medicine","url":"https://api.seqco.de/v1/subjects/11.json"},{"id":9,"name":"Microbiology","url":"https://api.seqco.de/v1/subjects/9.json"}]},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json","link_ext":"https://doi.org/10.1099/ijs.0.63655-0","title":"Phylogenetic positions of ‘Candidatus Phytoplasma asteris' and Spiroplasma kunkelii as inferred from multiple sets of concatenated core housekeeping proteins","journal":"International Journal of Systematic and Evolutionary Microbiology","journal_loc":"55 (5)","journal_date":"2005-09-01","pub_type":"journal-article","abstract":"\u003cjats:p\u003ePhytopathogenic mollicutes, which include spiroplasmas and phytoplasmas, are cell wall-less bacteria that parasitize plant hosts and insect vectors. Knowledge of the evolution of these agents is important in understanding their biology. The availability of the first complete phytoplasma and several partial spiroplasma and phytoplasma genome sequences made possible an investigation of evolutionary relationships between phytopathogenic mollicutes and other micro-organisms, especially Gram-positive bacteria, using a comparative genomics approach. Genome data from a total of 41 bacterial species were used in the analysis. Sixty-one conserved proteins were selected from each species for the construction of a hypothetical phylogenetic tree. The genes encoding these selected proteins are among a core of genetic elements that constitute a hypothetical minimal genome. The proteins were concatenated into five superproteins according to their functional categories, and phylogenetic trees were reconstructed using distance, parsimony and likelihood methods. Phylogenetic trees based on the five sets of concatenated proteins were congruent in both clade topology and relative branching length.\u003cjats:italic\u003eSpiroplasma kunkelii\u003c/jats:italic\u003eand phytoplasmas clustered together with other mollicutes, forming a monophyletic group. Phytoplasmas diverged from spiroplasmas and mycoplasmas at early stages in the evolution of mollicutes. Branch lengths on the phylogenetic trees were noticeably longer in the\u003cjats:italic\u003eMollicutes\u003c/jats:italic\u003eclade, suggesting that the genes encoding the five sets of proteins evolved at a greater rate in this clade than in other clades. This observation reinforces the concept that mollicutes have rapidly evolving genomes.\u003c/jats:p\u003e","long_citation_html":"Zhao et al. (2005). Phylogenetic positions of ‘Candidatus Phytoplasma asteris\u0026#39; and Spiroplasma kunkelii as inferred from multiple sets of concatenated core housekeeping proteins.\n\u003ci\u003eInternational Journal of Systematic and Evolutionary Microbiology\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1099/ijs.0.63655-0\" target=\"_blank\"\u003eDOI: 10.1099/ijs.0.63655-0\u003c/a\u003e\n","created_at":"2019-04-15T18:46:05.580Z","updated_at":"2025-11-06T11:25:59.635Z","authors":[{"id":1972,"given":"Yan","family":"Zhao","created_at":"2019-04-15T18:47:03.264Z","updated_at":"2019-04-15T18:47:03.264Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/1972.json"},{"id":1973,"given":"Robert E.","family":"Davis","created_at":"2019-04-15T18:47:03.276Z","updated_at":"2019-04-15T18:47:03.276Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/1973.json"},{"id":1970,"given":"Ing-Ming","family":"Lee","created_at":"2019-04-15T18:47:03.240Z","updated_at":"2019-04-15T18:47:03.240Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/1970.json"}],"names":[{"id":21,"name":"Candidatus Phytoplasma asteris","url":"https://api.seqco.de/v1/names/21.json","uri":"https://seqco.de/i:21"}],"subjects":[{"id":2,"name":"Ecology, Evolution, Behavior and Systematics","url":"https://api.seqco.de/v1/subjects/2.json"},{"id":11,"name":"General Medicine","url":"https://api.seqco.de/v1/subjects/11.json"},{"id":9,"name":"Microbiology","url":"https://api.seqco.de/v1/subjects/9.json"}]},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json","link_ext":"https://doi.org/10.1099/ijs.0.63572-0","title":"‘Candidatus Protochlamydia amoebophila’, an endosymbiont of Acanthamoeba spp.","journal":"International Journal of Systematic and Evolutionary Microbiology","journal_loc":"55 (5)","journal_date":"2005-09-01","pub_type":"journal-article","abstract":"\u003cjats:p\u003eThe obligately intracellular coccoid bacterium UWE25, a symbiont of \u003cjats:italic\u003eAcanthamoeba\u003c/jats:italic\u003e spp., was previously identified as being related to chlamydiae based upon the presence of a chlamydia-like developmental cycle and its 16S rRNA gene sequence. Analysis of its complete genome sequence demonstrated that UWE25 shows many characteristic features of chlamydiae, including dependency on host-derived metabolites, composition of the cell envelope and the ability to thrive as an energy parasite within the cells of its eukaryotic host. Phylogenetic analysis of 44 ribosomal proteins further confirmed the affiliation of UWE25 to the ‘\u003cjats:italic\u003eChlamydiae\u003c/jats:italic\u003e’. Within this phylum, UWE25 could be assigned to the family \u003cjats:italic\u003eParachlamydiaceae\u003c/jats:italic\u003e based on comparative analyses of the 16S rRNA, 23S rRNA and endoribonuclease P RNA genes. The distinct dissimilarities from its closest relative, \u003cjats:italic\u003eParachlamydia acanthamoebae\u003c/jats:italic\u003e Bn\u003cjats:sub\u003e9\u003c/jats:sub\u003e\n                  \u003cjats:sup\u003eT\u003c/jats:sup\u003e (7·1, 9·7 and 28·8 %, respectively), observed in this analysis justify its classification in a new genus. Therefore, the name ‘\u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e Protochlamydia amoebophila’ is proposed for the designation of the \u003cjats:italic\u003eAcanthamoeba\u003c/jats:italic\u003e sp. symbiont UWE25 (=ATCC PRA-7).\u003c/jats:p\u003e","long_citation_html":"Collingro et al. (2005). ‘Candidatus Protochlamydia amoebophila’, an endosymbiont of Acanthamoeba spp.\n\u003ci\u003eInternational Journal of Systematic and Evolutionary Microbiology\u003c/i\u003e.\n\u003ca href=\"https://doi.org/10.1099/ijs.0.63572-0\" target=\"_blank\"\u003eDOI: 10.1099/ijs.0.63572-0\u003c/a\u003e\n","created_at":"2019-04-15T18:46:05.547Z","updated_at":"2025-11-06T11:25:57.743Z","authors":[{"id":4384,"given":"Astrid","family":"Collingro","created_at":"2019-04-15T19:26:30.382Z","updated_at":"2019-04-15T19:26:30.382Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant Pathology","doi":"10.1007/s10658-005-0298-9","url":"https://api.seqco.de/v1/publications/913.json"},{"id":197,"citation":"Bastianel et al., 2005, Applied and Environmental Microbiology","doi":"10.1128/aem.71.11.6473-6478.2005","url":"https://api.seqco.de/v1/publications/197.json"},{"id":175,"citation":"Hellemans et al., 2005, Antimicrobial Agents and Chemotherapy","doi":"10.1128/aac.49.11.4530-4535.2005","url":"https://api.seqco.de/v1/publications/175.json"},{"id":108,"citation":"Arocha et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63797-0","url":"https://api.seqco.de/v1/publications/108.json"},{"id":912,"citation":"Chigira, Miura, 2005, Experimental and Applied Acarology","doi":"10.1007/s10493-005-0592-4","url":"https://api.seqco.de/v1/publications/912.json"},{"id":3341,"citation":"Hoffmann et al., 2005, Algological Studies/Archiv für Hydrobiologie, Supplement Volumes","doi":"10.1127/1864-1318/2005/0117-0095","url":"https://api.seqco.de/v1/publications/3341.json"},{"id":107,"citation":"Teixeira et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63677-0","url":"https://api.seqco.de/v1/publications/107.json"},{"id":106,"citation":"Zhao et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63655-0","url":"https://api.seqco.de/v1/publications/106.json"},{"id":104,"citation":"Collingro et al., 2005, International Journal of Systematic and Evolutionary Microbiology","doi":"10.1099/ijs.0.63572-0","url":"https://api.seqco.de/v1/publications/104.json"}],"url":"https://api.seqco.de/v1/authors/4384.json"},{"id":4386,"given":"Elena R.","family":"Toenshoff","created_at":"2019-04-15T19:26:30.400Z","updated_at":"2019-04-15T19:26:30.400Z","publications":[{"id":914,"citation":"Zhilina et al., 2005, Microbiology","doi":"10.1007/s11021-005-0126-4","url":"https://api.seqco.de/v1/publications/914.json"},{"id":913,"citation":"Conci et al., 2005, European Journal of Plant 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