{"response":{"status":"ok","message_type":"publication"},"id":2861,"citation":"Asem et al., 2019, Bergey's Manual of Systematics of Archaea and Bacteria","doi":"10.1002/9781118960608.gbm01757","url":"https://api.seqco.de/v1/publications/2861.json","link_ext":"https://doi.org/10.1002/9781118960608.gbm01757","title":"\u003ci\u003e\n                      \u003cscp\u003eS\u003c/scp\u003e\n                      ciscionella\n                    \u003c/i\u003e","journal":"Bergey's Manual of Systematics of Archaea and Bacteria","journal_loc":"","journal_date":"2019-09-09","pub_type":"other","abstract":"\u003cjats:title\u003eAbstract\u003c/jats:title\u003e\n                  \u003cjats:sec\u003e\n                    \u003cjats:label/\u003e\n                    \u003cjats:p\u003e\n                      Sci.sci.o.nel'la. N.L. fem. dim. n.\n                      \u003cjats:italic\u003eSciscionella\u003c/jats:italic\u003e\n                      arbitrary name formed from the acronym of the South China Sea Institute of Oceanology, SCISCIO, where taxonomic studies on this taxon were performed.\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      The genus\n                      \u003cjats:italic\u003eSciscionella\u003c/jats:italic\u003e\n                      is classified as a member of the family\n                      \u003cjats:italic\u003ePseudonocardiaceae\u003c/jats:italic\u003e\n                      , order\n                      \u003cjats:italic\u003ePseudonocardiales\u003c/jats:italic\u003e\n                      , and in the class\n                      \u003cjats:italic\u003eActinobacteria\u003c/jats:italic\u003e\n                      . The member of this genus has a 16S rRNA sequence identity of less than 94% with the other members of the family\n                      \u003cjats:italic\u003ePseudonocardiaceae\u003c/jats:italic\u003e\n                      . In the phylogenetic tree based on 16S rRNA gene sequences, the single member of this genus,\n                      \u003cjats:italic\u003eSciscionella marina\u003c/jats:italic\u003e\n                      , forms a distant clade, closely related to the genera\n                      \u003cjats:italic\u003eHaloechinothrix, Thermocrispum\u003c/jats:italic\u003e\n                      , and\n                      \u003cjats:italic\u003eYuhushiella\u003c/jats:italic\u003e\n                      . Cells are characterized with cell‐wall chemotype IV and phospholipid pattern type III\n                      \u003cjats:italic\u003esensu\u003c/jats:italic\u003e\n                      Lechevalier et al. 1977. The predominant respiratory quinone is MK‐9(H\n                      \u003cjats:sub\u003e4\u003c/jats:sub\u003e\n                      ), and the fatty acid composition is dominated by saturated branched‐chain fatty acids, but not mycolic acids. Phenotypically, strains are aerobic and stain Gram‐positive. They could grow at 10–37°C, pH 6.0–8.0, and in the presence of up to 13% NaCl (w/v). The genus comprises one species,\n                      \u003cjats:italic\u003eSciscionella marina\u003c/jats:italic\u003e\n                      (the type species of the genus).\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:italic\u003eDNA G + C content (mol%)\u003c/jats:italic\u003e\n                      : 68 (WGS).\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:italic\u003eType species\u003c/jats:italic\u003e\n                      :\n                      \u003cjats:bold\u003eSciscionella marina\u003c/jats:bold\u003e\n                      Tian, Zhi, Qiu, Zhang, Tang, Xu et al. 2009, 225\n                      \u003cjats:sup\u003eVP\u003c/jats:sup\u003e\n                      .\n                    \u003c/jats:p\u003e\n                  \u003c/jats:sec\u003e\n                  \u003cjats:sec\u003e\n                    \u003cjats:title\u003eTaxonomic and Nomenclature Notes\u003c/jats:title\u003e\n                    \u003cjats:p\u003e\n                      According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/genus/sciscionella\"\u003e\n                        \u003cjats:italic\u003eSciscionella\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      is: correct name (last update, February 2025)\n                      \u003cjats:sup\u003e*\u003c/jats:sup\u003e\n                      .\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:bold\u003eLPSN classification:\u003c/jats:bold\u003e\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/domain/bacteria\"\u003e\n                        \u003cjats:italic\u003eBacteria\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/kingdom/bacillati\"\u003e\n                        \u003cjats:italic\u003eBacillati\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/phylum/actinomycetota\"\u003e\n                        \u003cjats:italic\u003eActinomycetota\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/class/actinomycetes\"\u003e\n                        \u003cjats:italic\u003eActinomycetes\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/order/pseudonocardiales\"\u003e\n                        \u003cjats:italic\u003ePseudonocardiales\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/family/pseudonocardiaceae\"\u003e\n                        \u003cjats:italic\u003ePseudonocardiaceae\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/genus/sciscionella\"\u003e\n                        \u003cjats:italic\u003eSciscionella\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      The genus\n                      \u003cjats:italic\u003eSciscionella\u003c/jats:italic\u003e\n                      can also be recovered in the Genome Taxonomy Database (GTDB) as\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=g__Sciscionella\"\u003e\n                        \u003cjats:italic\u003eg__Sciscionella\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      (version v220)\n                      \u003cjats:sup\u003e**\u003c/jats:sup\u003e\n                      .\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:bold\u003eGTDB classification:\u003c/jats:bold\u003e\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=d__Bacteria\"\u003e\n                        \u003cjats:italic\u003ed__Bacteria\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=p__Actinomycetota\"\u003e\n                        \u003cjats:italic\u003ep__Actinomycetota\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=c__Actinomycetes\"\u003e\n                        \u003cjats:italic\u003ec__Actinomycetes\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=o__Mycobacteriales\"\u003e\n                        \u003cjats:italic\u003eo__Mycobacteriales\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=f__Pseudonocardiaceae\"\u003e\n                        \u003cjats:italic\u003ef__Pseudonocardiaceae\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=g__Sciscionella\"\u003e\n                        \u003cjats:italic\u003eg__Sciscionella\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:sup\u003e*\u003c/jats:sup\u003e\n                      \u003cjats:mixed-citation publication-type=\"journal\"\u003e\n                        \u003cjats:string-name\u003e\n                          \u003cjats:surname\u003eMeier‐Kolthoff\u003c/jats:surname\u003e\n                        \u003c/jats:string-name\u003e\n                        et al. (\n                        \u003cjats:year\u003e2022\u003c/jats:year\u003e\n                        ).\n                        \u003cjats:source\u003eNucleic Acids Res\u003c/jats:source\u003e\n                        ,\n                        \u003cjats:volume\u003e50\u003c/jats:volume\u003e\n                        ,\n                        \u003cjats:fpage\u003eD801\u003c/jats:fpage\u003e\n                        –\n                        \u003cjats:lpage\u003eD807\u003c/jats:lpage\u003e\n                        ; DOI:\n                        \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093/nar/gkab902\"\u003e10.1093/nar/gkab902\u003c/jats:ext-link\u003e\n                      \u003c/jats:mixed-citation\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:sup\u003e**\u003c/jats:sup\u003e\n                      \u003cjats:mixed-citation publication-type=\"journal\"\u003e\n                        \u003cjats:string-name\u003e\n                          \u003cjats:surname\u003eParks\u003c/jats:surname\u003e\n                        \u003c/jats:string-name\u003e\n                        et al. (\n                        \u003cjats:year\u003e2022\u003c/jats:year\u003e\n                        ).\n                        \u003cjats:source\u003eNucleic Acids Res\u003c/jats:source\u003e\n                        ,\n                        \u003cjats:volume\u003e50\u003c/jats:volume\u003e\n                        ,\n                        \u003cjats:fpage\u003eD785\u003c/jats:fpage\u003e\n                        –\n                        \u003cjats:lpage\u003eD794\u003c/jats:lpage\u003e\n                        ; DOI:\n                        \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093/nar/gkab776\"\u003e10.1093/nar/gkab776\u003c/jats:ext-link\u003e\n                      \u003c/jats:mixed-citation\u003e\n                    \u003c/jats:p\u003e\n                  \u003c/jats:sec\u003e","long_citation_html":"Asem et al. (2019). \u003ci\u003e\n                      \u0026lt;scp\u0026gt;S\u0026lt;/scp\u0026gt;\n                      ciscionella\n                    \u003c/i\u003e. \n\u003ci\u003eBergey\u0026#39;s Manual of Systematics of Archaea and Bacteria\u003c/i\u003e. \u003ca href=\"https://doi.org/10.1002/9781118960608.gbm01757\" target=\"_blank\"\u003eDOI:10.1002/9781118960608.gbm01757\u003c/a\u003e\n","created_at":"2023-03-01T03:18:15.409Z","updated_at":"2025-11-06T14:14:51.505Z","authors":[{"id":11421,"given":"Mipeshwaree Devi","family":"Asem","created_at":"2023-03-01T03:18:15.416Z","updated_at":"2023-03-01T03:18:15.416Z","url":"https://api.seqco.de/v1/authors/11421.json"},{"id":10194,"given":"Nimaichand","family":"Salam","created_at":"2022-04-04T08:10:05.901Z","updated_at":"2022-04-04T08:10:05.901Z","url":"https://api.seqco.de/v1/authors/10194.json"},{"id":11422,"given":"Jian‐Yu","family":"Jiao","created_at":"2023-03-01T03:18:15.433Z","updated_at":"2023-03-01T03:18:15.433Z","url":"https://api.seqco.de/v1/authors/11422.json"},{"id":11423,"given":"Wen‐Jun","family":"Li","created_at":"2023-03-01T03:18:15.442Z","updated_at":"2023-03-01T03:18:15.442Z","url":"https://api.seqco.de/v1/authors/11423.json"}],"names":[],"subjects":[]}