{"response":{"status":"ok","message_type":"publication"},"id":3882,"citation":"Moumen, Delafont, 2024, Bergey's Manual of Systematics of Archaea and Bacteria","doi":"10.1002/9781118960608.pbm00058","url":"https://api.seqco.de/v1/publications/3882.json","link_ext":"https://doi.org/10.1002/9781118960608.pbm00058","title":"Candidatus\n                    \u003ci\u003eBabelota\u003c/i\u003e","journal":"Bergey's Manual of Systematics of Archaea and Bacteria","journal_loc":"","journal_date":"2024-12-30","pub_type":"other","abstract":"\u003cjats:title\u003eAbstract\u003c/jats:title\u003e\n                  \u003cjats:sec\u003e\n                    \u003cjats:label/\u003e\n                    \u003cjats:p\u003e\n                      Ba.be.lo'ta. N.L. fem. n.\n                      \u003cjats:italic\u003eBabela\u003c/jats:italic\u003e\n                      , a\n                      \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n                      genus name; L. neut. pl. n. suff. ‐\n                      \u003cjats:italic\u003eota\u003c/jats:italic\u003e\n                      , ending to denote a phylum; N.L. neut. pl. n.\n                      \u003cjats:italic\u003eBabelota\u003c/jats:italic\u003e\n                      , the\n                      \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n                      Babela phylum.\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:italic\u003eCandidatus\u003c/jats:italic\u003e\n                      Babelota is a phylum of strictly intracellular bacteria, currently divided into two class‐level groups and at least five orders based on 16S rRNA sequence analyses. However, all known biological isolates to date belong to the same order of the Babelales, within the Babelia class. Presently, four isolates representing three families have been described and maintained in laboratory cultures through the cultivation of their hosts, which are known to be amoeboid and flagellated protists. Genomic analysis of\n                      \u003cjats:italic\u003eCa\u003c/jats:italic\u003e\n                      . Babelota consistently reveals a profound reduction in metabolic capabilities, suggesting a phylum‐wide, conserved parasitic lifestyle. To date, all lineages covered by genomic data indicate that parasitism is a defining trait of this phylum.\n                      \u003cjats:italic\u003eCa\u003c/jats:italic\u003e\n                      . Babelota exhibits a cosmopolitan environmental distribution, with sequences detected across a spectrum of habitats including soil, freshwater, and saline or hypersaline water bodies.\n                    \u003c/jats:p\u003e\n                  \u003c/jats:sec\u003e\n                  \u003cjats:sec\u003e\n                    \u003cjats:title\u003eTaxonomic and Nomenclature Notes\u003c/jats:title\u003e\n                    \u003cjats:p\u003e\n                      According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the phylum\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/phylum/babelota\"\u003e\n                        \u003cjats:italic\u003eCandidatus Babelota\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      is: preferred name (not correct name) (last update, February 2025)\n                      \u003cjats:sup\u003e*\u003c/jats:sup\u003e\n                      .\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:bold\u003eLPSN classification:\u003c/jats:bold\u003e\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/domain/bacteria\"\u003e\n                        \u003cjats:italic\u003eBacteria\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/kingdom/bacteria-no-kingdom\"\u003e\n                        \u003cjats:italic\u003eincertae sedis\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://lpsn.dsmz.de/phylum/babelota\"\u003e\n                        \u003cjats:italic\u003eCandidatus Babelota\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      The phylum\n                      \u003cjats:italic\u003eCandidatus Babelota\u003c/jats:italic\u003e\n                      can also be recovered in the Genome Taxonomy Database (GTDB) as\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=p__Dependentiae\"\u003e\n                        \u003cjats:italic\u003ep__Dependentiae\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      (version v220)\n                      \u003cjats:sup\u003e**\u003c/jats:sup\u003e\n                      .\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:bold\u003eGTDB classification:\u003c/jats:bold\u003e\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=d__Bacteria\"\u003e\n                        \u003cjats:italic\u003ed__Bacteria\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                      /\n                      \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" xlink:href=\"https://gtdb.ecogenomic.org/tree?r=p__Dependentiae\"\u003e\n                        \u003cjats:italic\u003ep__Dependentiae\u003c/jats:italic\u003e\n                      \u003c/jats:ext-link\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:sup\u003e*\u003c/jats:sup\u003e\n                      \u003cjats:mixed-citation publication-type=\"journal\"\u003e\n                        \u003cjats:string-name\u003e\n                          \u003cjats:surname\u003eMeier‐Kolthoff\u003c/jats:surname\u003e\n                        \u003c/jats:string-name\u003e\n                        et al. (\n                        \u003cjats:year\u003e2022\u003c/jats:year\u003e\n                        ).\n                        \u003cjats:source\u003eNucleic Acids Res\u003c/jats:source\u003e\n                        ,\n                        \u003cjats:volume\u003e50\u003c/jats:volume\u003e\n                        ,\n                        \u003cjats:fpage\u003eD801\u003c/jats:fpage\u003e\n                        –\n                        \u003cjats:lpage\u003eD807\u003c/jats:lpage\u003e\n                        ; DOI:\n                        \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093/nar/gkab902\"\u003e10.1093/nar/gkab902\u003c/jats:ext-link\u003e\n                      \u003c/jats:mixed-citation\u003e\n                    \u003c/jats:p\u003e\n                    \u003cjats:p\u003e\n                      \u003cjats:sup\u003e**\u003c/jats:sup\u003e\n                      \u003cjats:mixed-citation publication-type=\"journal\"\u003e\n                        \u003cjats:string-name\u003e\n                          \u003cjats:surname\u003eParks\u003c/jats:surname\u003e\n                        \u003c/jats:string-name\u003e\n                        et al. (\n                        \u003cjats:year\u003e2022\u003c/jats:year\u003e\n                        ).\n                        \u003cjats:source\u003eNucleic Acids Res\u003c/jats:source\u003e\n                        ,\n                        \u003cjats:volume\u003e50\u003c/jats:volume\u003e\n                        ,\n                        \u003cjats:fpage\u003eD785\u003c/jats:fpage\u003e\n                        –\n                        \u003cjats:lpage\u003eD794\u003c/jats:lpage\u003e\n                        ; DOI:\n                        \u003cjats:ext-link xmlns:xlink=\"http://www.w3.org/1999/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093/nar/gkab776\"\u003e10.1093/nar/gkab776\u003c/jats:ext-link\u003e\n                      \u003c/jats:mixed-citation\u003e\n                    \u003c/jats:p\u003e\n                  \u003c/jats:sec\u003e","long_citation_html":"Moumen, Delafont (2024). Candidatus\n                    \u003ci\u003eBabelota\u003c/i\u003e. \n\u003ci\u003eBergey\u0026#39;s Manual of Systematics of Archaea and Bacteria\u003c/i\u003e. \u003ca href=\"https://doi.org/10.1002/9781118960608.pbm00058\" target=\"_blank\"\u003eDOI:10.1002/9781118960608.pbm00058\u003c/a\u003e\n","created_at":"2024-12-30T23:00:18.450Z","updated_at":"2025-11-06T11:20:16.137Z","authors":[{"id":11451,"given":"Bouziane","family":"Moumen","created_at":"2023-03-09T23:00:48.490Z","updated_at":"2023-03-09T23:00:48.490Z","url":"https://api.seqco.de/v1/authors/11451.json"},{"id":15234,"given":"Vincent","family":"Delafont","created_at":"2024-12-30T23:00:18.475Z","updated_at":"2024-12-30T23:00:18.475Z","url":"https://api.seqco.de/v1/authors/15234.json"}],"names":[{"id":37547,"name":"Babela","url":"https://api.seqco.de/v1/names/37547.json","uri":"https://seqco.de/i:37547"},{"id":46758,"name":"Candidatus Babelota","url":"https://api.seqco.de/v1/names/46758.json","uri":"https://seqco.de/i:46758"}],"subjects":[]}